D. Barua*, J. Kim*, and J. L. Reed, “An automated phenotype-driven approach for refining metabolic and regulatory network modelsâ€, PLoS Computational Biology 6, e1000970 (2010).
K. R. Martin*, D. Barua*, W. S. Hlavacek, and J. P. MacKeigan, “Computational model for autophagic vesicle dynamics in single cellsâ€, Autophagy 9, 74-92 (2013).
D. Barua, W. S. Hlavacek, and T. Lipniacki, “A Computational Model for Early Events in B Cell Antigen Receptor Signaling: Analysis of the Roles of Lyn and Fynâ€, The Journal of Immunology 189, 646-658 (2012).
D. Barua and W. S. Hlavacek, “Modeling the effect of APC truncation on destruction complex function in colorectal cancer cellsâ€, PLoS Computational Biology 9, e1003217 (2013).
N. Kozer*, D. Barua*, S. Orchard, E. C. Nice, A. W. Burgess, W. S. Hlavacek, and A. H. A. Clayton, “Exploring higher-order EGFR oligomerisation and phosphorylation – a combined experimental and theoretical approachâ€, Molecular Biosystems 9, 1849-1863 (2013).